Article
Uncommonly isolated clinical Pseudomonas: identification and phylogenetic assignation.
European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology - 1 Feb 2017
Mulet M, Gomila M, Ramírez A, Cardew S, Moore E R B, Lalucat J, García-Valdés E
Abstract excerpt
Fifty-two Pseudomonas strains that were difficult to identify at the species level in the phenotypic routine characterizations employed by clinical microbiology laboratories were selected for genotypic-based analysis. Species level identifications were done initially by partial sequencing of the DNA dependent RNA polymerase sub-unit D gene (rpoD). Two other gene sequences, for the small sub-unit ribosonal RNA...
Topics
- Cluster Analysis
- DNA Gyrase
- DNA, Bacterial
- DNA, Ribosomal
- DNA-Directed RNA Polymerases
- Genotype
- Humans
- Multilocus Sequence Typing
- Phenotype
- Phylogeny
- Pseudomonas
- Pseudomonas Infections
- RNA, Ribosomal, 16S
- Sequence Analysis, DNA