Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Identification of CR1 retroposons in Arborophila rufipectus and their application to Phasianidae phylogeny.

Molecular ecology resources - 1 Jul 2016

Cui Yaoyao, Yan Chaochao, Sun Tianlin, Li Jing, Yue Bisong, Zhang Xiuyue, Li Jing

Abstract excerpt

Chicken repeat 1 (CR1), a member of non-LTR retroposon, is an important phylogenetic marker in avian systematics. In this study, we reported several characteristics of CR1 elements in a draft genome of Arborophila rufipectus (Sichuan partridge). According to the analyses of RepeatMasker, approximately 254 966 CR1 elements were identified in A. rufipectus, covering 6.7% of the genome. Subsequently, we selected...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chickens
Share to Galliformes
Share to Genetic Variation

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Phylogeny

Share to Retroelements

Share to Sequence Analysis, DNA

Share to Turkeys

Source

Identifiers

PMID: 26929266
DOI: 10.1111/1755-0998.12514

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Identification of CR1 retroposons in Arborophila rufipectus and their application to Phasianidae phylogeny.PMID 26929266Read ↗

Evolution of chicken repeat 1 (CR1) elements: evidence for ancient subfamilies and multiple progenitors.Semantic proximity Read ↗

Avian germline-restricted chromosomes are reservoirs for active long-terminal-repeat retrovirusesSemantic proximity Read ↗

Ancient Persistence and Newfound Diversity of CR1-Group Retrotransposons Across Vertebrates.Semantic proximity Read ↗

Karyotypic Evolution and Chromosomal Organization of Repetitive DNA Sequences in Species of Panaque, Panaqolus, and Scobinancistrus (Siluriformes and Loricariidae) from the Amazon Basin.Semantic proximity Read ↗

Association analysis of repetitive elements and R-loop formation across speciesSemantic proximity Read ↗

Genome-wide characterization of long terminal repeat retrotransposons provides insights into trait evolution of four cucurbit species.Semantic proximity Read ↗

Evolution of bird genomes-a transposon's-eye view.Semantic proximity Read ↗

Endogenous pararetrovirus sequences associated with 24 nt small RNAs at the centromeres of Fritillaria imperialis L. (Liliaceae), a species with a giant genome.Semantic proximity Read ↗

Association analysis of repetitive elements and R-loop formation across speciesSemantic proximity Read ↗

Abundant recent activity of retrovirus-like retrotransposons within and among flycatcher species implies a rich source of structural variation in songbird genomes.Semantic proximity Read ↗

Unexpected diversity and expression of avian endogenous retroviruses.Semantic proximity Read ↗

Conservation and losses of non-coding RNAs in avian genomes.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.