Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Light-RCV: a lightweight read coverage viewer for next generation sequencing data.

BMC bioinformatics - 1 Jan 2015

Chang Che-Wei, Lee Wen-Bin, Chen-Deng An, Liu Tsunglin, Tseng Joseph T, Chang Darby Tien-Hao

Abstract excerpt

BACKGROUND: Next-generation sequencing (NGS) technologies has brought an unprecedented amount of genomic data for analysis. Unlike array-based profiling technologies, NGS can reveal the expression profile across a transcript at the base level. Such a base-level read coverage provides further insights for alternative mRNA splicing, single-nucleotide polymorphism (SNP), novel transcript discovery, etc. However, to...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genomics
Share to Algorithms
Share to Genome, Fungal

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Internet

Share to RNA Splicing

Share to Saccharomyces cerevisiae

Share to User-Computer Interface

Source

Open in PubMed Open full text

Identifiers

PMID: 26680734
DOI: 10.1186/1471-2105-16-S18-S11
PMCID: PMC4682413

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Light-RCV: a lightweight read coverage viewer for next generation sequencing data.PMID 26680734Read ↗

MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation.Semantic proximity Read ↗

ReadXplorer--visualization and analysis of mapped sequences.Semantic proximity Read ↗

Visualization tools for human structural variations identified by whole-genome sequencing.Semantic proximity Read ↗

Savant: genome browser for high-throughput sequencing data.Semantic proximity Read ↗

igv-reports: embedding interactive genomic visualizations in HTML reports to aid variant review.Semantic proximity Read ↗

VisVariant: A java program to visualise genetic variants in next-generation sequencing dataSemantic proximity Read ↗

CoverView: a sequence quality evaluation tool for next generation sequencing dataSemantic proximity Read ↗

CNVizard – a lightweight streamlit application for an interactive analysis of copy number variantsSemantic proximity Read ↗

Rapid, Reliable, and Interpretable CNV Curation Visualizations for Diagnostic Settings with SeeNVSemantic proximity Read ↗

Overview of Genomic Tools for Circular Visualization in next-Generation Genomic Sequencing EraSemantic proximity Read ↗

Oviz-Bio: a web-based platform for interactive cancer genomics data visualization.Semantic proximity Read ↗

Complex structural variant visualization with SVTopoSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.