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Article

Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants.

BMC genomics - 8 Jul 2015

Kuhn Alexandre, Ong Yao Min, Quake Stephen R, Burkholder William F

Abstract excerpt

BACKGROUND: Like other structural variants, transposable element insertions can be highly polymorphic across individuals. Their functional impact, however, remains poorly understood. Current genome-wide approaches for genotyping insertion-site polymorphisms based on targeted or whole-genome sequencing remain very expensive and can lack accuracy, hence new large-scale genotyping methods are needed. RESULTS: We...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 26153459
DOI: 10.1186/s12864-015-1700-4
PMCID: PMC4494700

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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