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Analysis of codon usage pattern evolution in avian rotaviruses and their preferred host.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Aug 2015

Kattoor Jobin Jose, Malik Yashpal Singh, Sasidharan Aravind, Rajan Vishnuraj Mangalathu, Dhama Kuldeep, Ghosh Souvik, Bányai Krisztián, Kobayashi Nobumichi, Singh Raj Kumar

Abstract excerpt

Rotavirus infection is a worldwide problem, with occurrence of highly divergent viruses classified in 8 species (A-H). We report here the evolution assessment of codon usage patterns in virus-host system in avian rotavirus (AvRV) of species RVA, RVD, RVF and RVG (preferentially affecting birds). The nucleotide contents, codon usage bias (CUB), relative synonymous codon usage (RSCU), and effective number of codons...

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PMID: 26086995
DOI: 10.1016/j.meegid.2015.06.018

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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