Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Fully automated pipeline for detection of sex linked genes using RNA-Seq data.

BMC bioinformatics - 11 Mar 2015

Michalovova Monika, Kubat Zdenek, Hobza Roman, Vyskot Boris, Kejnovsky Eduard

Abstract excerpt

BACKGROUND: Sex chromosomes present a genomic region which to some extent, differs between the genders of a single species. Reliable high-throughput methods for detection of sex chromosomes specific markers are needed, especially in species where genome information is limited. Next generation sequencing (NGS) opens the door for identification of unique sequences or searching for nucleotide polymorphisms between...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genes, X-Linked
Share to Genetic Markers
Share to Genome, Human

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Polymerase Chain Reaction

Share to Sequence Analysis, RNA

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 25884927
DOI: 10.1186/s12859-015-0509-0
PMCID: PMC4367819

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Fully automated pipeline for detection of sex linked genes using RNA-Seq data.PMID 25884927Read ↗

Male Linked Genomic Region Determines Sex in Dioecious Amaranthus palmeri.Semantic proximity Read ↗

Construction of high-density genetic maps defined sex determination region of the Y chromosome in spinach.Semantic proximity Read ↗

Mapping and validation of the major sex-determining region in Nile tilapia (Oreochromis niloticus L.) Using RAD sequencing.Semantic proximity Read ↗

Construction of a high-density genetic map and the X/Y sex-determining gene mapping in spinach based on large-scale markers developed by specific-locus amplified fragment sequencing (SLAF-seq).Semantic proximity Read ↗

Development of an X-specific marker and identification of YY individuals in spinach.Semantic proximity Read ↗

SexFindR: A computational workflow to identify young and old sex chromosomesSemantic proximity Read ↗

High-density interspecific genetic maps of kiwifruit and the identification of sex-specific markers.Semantic proximity Read ↗

De Novo Assembly and Annotation of 11 Diverse Shrub Willow (Salix) Genomes Reveals Novel Gene Organization in Sex-Linked Regions.Semantic proximity Read ↗

Candidate genes within a 143 kb region of the flower sex locus in Vitis.Semantic proximity Read ↗

Reference-based genome assembly and comparative genomics of Calamus Brandisii Becc. for unveiling sex-specific genes for early gender detection.Semantic proximity Read ↗

A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes.Semantic proximity Read ↗

Genomic exploration and molecular marker development in a large and complex conifer genome using RADseq and mRNAseq.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.