Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don.

doi:10.1093/dnares/dsv002

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Article

Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don.

DNA research : an international journal for rapid publication of reports on genes and genomes - 1 Apr 2015

Hirakawa Hideki, Okada Yoshihiro, Tabuchi Hiroaki, Shirasawa Kenta, Watanabe Akiko, Tsuruoka Hisano, Minami Chiharu, Nakayama Shinobu, Sasamoto Shigemi, Kohara Mitsuyo, Kishida Yoshie, Fujishiro Tsunakazu, Kato Midori, Nanri Keiko, Komaki Akiko, Yoshinaga Masaru, Takahata Yasuhiro, Tanaka Masaru, Tabata Satoshi, Isobe Sachiko N

Abstract excerpt

Ipomoea trifida (H. B. K.) G. Don. is the most likely diploid ancestor of the hexaploid sweet potato, I. batatas (L.) Lam. To assist in analysis of the sweet potato genome, de novo whole-genome sequencing was performed with two lines of I. trifida, namely the selfed line Mx23Hm and the highly heterozygous line 0431-1, using the Illumina HiSeq platform. We classified the sequences thus obtained as either 'core...

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PMID: 25805887
DOI: 10.1093/dnares/dsv002
PMCID: PMC4401327

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