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Article

Novel R pipeline for analyzing Biolog Phenotypic MicroArray data.

PloS one - 1 Jan 2015

Vehkala Minna, Shubin Mikhail, Connor Thomas R, Thomson Nicholas R, Corander Jukka

Abstract excerpt

Data produced by Biolog Phenotype MicroArrays are longitudinal measurements of cells' respiration on distinct substrates. We introduce a three-step pipeline to analyze phenotypic microarray data with novel procedures for grouping, normalization and effect identification. Grouping and normalization are standard problems in the analysis of phenotype microarrays defined as categorizing bacterial responses into...

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Identifiers

PMID: 25786143
DOI: 10.1371/journal.pone.0118392
PMCID: PMC4365023

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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