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AtCAST3.0 update: a web-based tool for analysis of transcriptome data by searching similarities in gene expression profiles.

Plant & cell physiology - 1 Jan 2015

Kakei Yusuke, Shimada Yukihisa

Abstract excerpt

In transcriptome experiments, the experimental conditions (e.g. mutants and/or treatments) cause transcriptional changes. Identifying experimental conditions that induce similar or opposite transcriptional changes can be useful to identify experimental conditions that affect the same biological process. AtCAST (http://atpbsmd.yokohama-cu.ac.jp) is a web-based tool to analyze the relationship between experimental...

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PMID: 25505006
DOI: 10.1093/pcp/pcu174

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

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