Article
De novo transcriptome assembly from inflorescence of Orchis italica: analysis of coding and non-coding transcripts.
PloS one - 1 Jan 2014
De Paolo Sofia, Salvemini Marco, Gaudio Luciano, Aceto Serena
Abstract excerpt
The floral transcriptome of Orchis italica, a wild orchid species, was obtained using Illumina RNA-seq technology and specific de novo assembly and analysis tools. More than 100 million raw reads were processed resulting in 132,565 assembled transcripts and 86,079 unigenes with an average length of 606 bp and N50 of 956 bp. Functional annotation assigned 38,984 of the unigenes to records present in the NCBI...
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