Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Clusthaplo: a plug-in for MCQTL to enhance QTL detection using ancestral alleles in multi-cross design.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 1 Apr 2014

Leroux Damien, Rahmani Abdelaziz, Jasson Sylvain, Ventelon Marjolaine, Louis Florence, Moreau Laurence, Mangin Brigitte

Abstract excerpt

KEY MESSAGE: We enhance power and accuracy of QTL mapping in multiple related families, by clustering the founders of the families on their local genomic similarity. MCQTL is a linkage mapping software application that allows the joint QTL mapping of multiple related families. In its current implementation, QTLs are modeled with one or two parameters for each parent that is a founder of the multi-cross design....

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosomes, Plant
Share to Cluster Analysis

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Crosses, Genetic

Share to Linkage Disequilibrium

Share to Markov Chains

Share to Mosaicism

Share to Quantitative Trait Loci

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 24482114
DOI: 10.1007/s00122-014-2267-1
PMCID: PMC3964294

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 3 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Clusthaplo: a plug-in for MCQTL to enhance QTL detection using ancestral alleles in multi-cross design.PMID 24482114Read ↗

MCQTL: multi-allelic QTL mapping in multi-cross design.Semantic proximity Read ↗

Fast and efficient QTL mapper for thousands of molecular phenotypes.Semantic proximity Read ↗

Combined linkage and linkage disequilibrium QTL mapping in multiple families of maize (Zea mays L.) line crosses highlights complementarities between models based on parental haplotype and single locus polymorphism.Semantic proximity Read ↗

High-performance pipeline for MutMap and QTL-seq.Semantic proximity Read ↗

How do the type of QTL effect and the form of the residual term influence QTL detection in multi-parent populations? A case study in the maize EU-NAM population.Semantic proximity Read ↗

Some ways to improve QTL mapping accuracy.Semantic proximity Read ↗

Multiallelic models for QTL mapping in diverse polyploid populations.Semantic proximity Read ↗

Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data.Semantic proximity Read ↗

The influence of QTL allelic diversity on QTL detection in multi-parent populations: a simulation study in sugar beet.Semantic proximity Read ↗

Four Parent Maize (FPM) Population: Effects of Mating Designs on Linkage Disequilibrium and Mapping Quantitative Traits.Semantic proximity Read ↗

Whole-genome analysis of multienvironment or multitrait QTL in MAGIC.Semantic proximity Read ↗

The use of MapPop1.0 for choosing a QTL mapping sample from an advanced backcross population.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.