Article
ClassyFlu: classification of influenza A viruses with Discriminatively trained profile-HMMs.
PloS one - 1 Jan 2014
Van der Auwera Sandra, Bulla Ingo, Ziller Mario, Pohlmann Anne, Harder Timm, Stanke Mario
Abstract excerpt
Accurate and rapid characterization of influenza A virus (IAV) hemagglutinin (HA) and neuraminidase (NA) sequences with respect to subtype and clade is at the basis of extended diagnostic services and implicit to molecular epidemiologic studies. ClassyFlu is a new tool and web service for the classification of IAV sequences of the HA and NA gene into subtypes and phylogenetic clades using discriminatively trained...
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