Article
Deep sequencing revealed genome-wide single-nucleotide polymorphism and plasmid content of Erwinia amylovora strains isolated in Middle Atlas, Morocco.
Research in microbiology - 1 Oct 2013
Hannou Najat, Mondy Samuel, Planamente Sara, Moumni Mohieddine, Llop Pablo, López María, Manceau Charles, Barny Marie-Anne, Faure Denis
Abstract excerpt
Erwinia amylovora causes economic losses that affect pear and apple production in Morocco. Here, we report comparative genomics of four Moroccan E. amylovora strains with the European strain CFBP1430 and North-American strain ATCC49946. Analysis of single nucleotide polymorphisms (SNPs) revealed genetic homogeneity of Moroccan's strains and their proximity to the European strain CFBP1430. Moreover, the collected...
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