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Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.

PloS one - 1 Jan 2012

Petroli César D, Sansaloni Carolina P, Carling Jason, Steane Dorothy A, Vaillancourt René E, Myburg Alexander A, da Silva Orzenil Bonfim, Pappas Georgios Joannis, Kilian Andrzej, Grattapaglia Dario

Abstract excerpt

Diversity Arrays Technology (DArT) provides a robust, high throughput, cost-effective method to query thousands of sequence polymorphisms in a single assay. Despite the extensive use of this genotyping platform for numerous plant species, little is known regarding the sequence attributes and genome-wide distribution of DArT markers. We investigated the genomic properties of the 7,680 DArT marker probes of a...

Topics

Chromosome Mapping
Chromosomes, Plant
Cost-Benefit Analysis
DNA, Plant
Eucalyptus
Genetic Linkage
Genetic Markers
Genome, Plant
Genomics
Genotype

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Microsatellite Repeats

Models, Genetic

Oligonucleotide Array Sequence Analysis

Sequence Analysis, DNA

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Identifiers

PMID: 22984541
DOI: 10.1371/journal.pone.0044684
PMCID: PMC3439404

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