Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.

BMC genomics - 3 Jan 2012

Scaglione Davide, Acquadro Alberto, Portis Ezio, Tirone Matteo, Knapp Steven J, Lanteri Sergio

Abstract excerpt

BACKGROUND: The globe artichoke (Cynara cardunculus L. var. scolymus) genome is relatively poorly explored, especially compared to those of the other major Asteraceae crops sunflower and lettuce. No SNP markers are in the public domain. We have combined the recently developed restriction-site associated DNA (RAD) approach with the Illumina DNA sequencing platform to effect the rapid and mass discovery of SNP...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Contig Mapping
Share to DNA Restriction Enzymes
Share to Gene Frequency

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genetic Linkage

Share to Genetic Markers

Share to Heterozygote

Share to Polymorphism, Single Nucleotide

Share to Sequence Analysis, DNA

Source

Open in PubMed Open full text

Identifiers

PMID: 22214349
DOI: 10.1186/1471-2164-13-3
PMCID: PMC3269995

Genes

CAPS

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.PMID 22214349Read ↗

Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa.Semantic proximity Read ↗

Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variation.Semantic proximity Read ↗

A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database.Semantic proximity Read ↗

Genetic mapping and annotation of genomic microsatellites isolated from globe artichoke.Semantic proximity Read ↗

Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus).Semantic proximity Read ↗

Development and characterization of microsatellite markers in Cynara cardunculus L.Semantic proximity Read ↗

Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database.Semantic proximity Read ↗

Retrotransposon-based S-SAP as a platform for the analysis of genetic variation and linkage in globe artichoke.Semantic proximity Read ↗

Genetic map of artichoke × wild cardoon: toward a consensus map for Cynara cardunculus.Semantic proximity Read ↗

Development of chloroplast genomic resources for Cynara.Semantic proximity Read ↗

SNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis.Semantic proximity Read ↗

Genetic diversity and accession structure in European Cynara cardunculus collections.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.