Article
Porcine single nucleotide polymorphism (SNP) development and population structure of pigs assessed by validated SNPs.
Biochemical genetics - 1 Jun 2012
Matsumoto Toshimi, Okumura Naohiko, Uenishi Hirohide, Hayashi Takeshi, Hamasima Noriyuki, Awata Takashi
Abstract excerpt
In this study, we identified porcine single nucleotide polymorphisms (SNPs) by aligning eight sequences generated with two approaches: amplification of 665 intronic regions using one sample from each of eight breeds, including three East Asian pigs, and amplification of 289 3'-UTR regions using two samples from each of four major commercial breeds. The 1,760 and 599 SNPs were validated using two 384-sample DNA...
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