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Article

Algorithms for MDC-based multi-locus phylogeny inference: beyond rooted binary gene trees on single alleles.

Journal of computational biology : a journal of computational molecular cell biology - 1 Nov 2011

Yu Yun, Warnow Tandy, Nakhleh Luay

Abstract excerpt

One of the criteria for inferring a species tree from a collection of gene trees, when gene tree incongruence is assumed to be due to incomplete lineage sorting (ILS), is Minimize Deep Coalescence (MDC). Exact algorithms for inferring the species tree from rooted, binary trees under MDC were recently introduced. Nevertheless, in phylogenetic analyses of biological data sets, estimated gene trees may differ from...

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Identifiers

PMID: 22035329
DOI: 10.1089/cmb.2011.0174
PMCID: PMC3216099

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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