Protein map: an alignment-free sequence comparison method based on various properties of amino acids.

Abstract excerpt

In this paper, we propose a new protein map which incorporates with various properties of amino acids. As a powerful tool for protein classification, this new protein map both considers phylogenetic factors arising from amino acid mutations and provides computational efficiency for the huge amount of data. The ten amino acid physico-chemical properties (the chemical composition of the side chain, two polarity...

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