Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Identification of SNP and SSR markers in eggplant using RAD tag sequencing.

BMC genomics - 10 Jun 2011

Barchi Lorenzo, Lanteri Sergio, Portis Ezio, Acquadro Alberto, Valè Giampiero, Toppino Laura, Rotino Giuseppe Leonardo

Abstract excerpt

BACKGROUND: The eggplant (Solanum melongena L.) genome is relatively unexplored, especially compared to those of the other major Solanaceae crops tomato and potato. In particular, no SNP markers are publicly available; on the other hand, over 1,000 SSR markers were developed and publicly available. We have combined the recently developed Restriction-site Associated DNA (RAD) approach with Illumina DNA sequencing...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Binding Sites
Share to Chromosome Mapping

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to DNA, Plant

Share to DNA Restriction Enzymes

Share to Genomics

Share to Minisatellite Repeats

Share to Molecular Sequence Annotation

Share to Solanum melongena

Source

Open in PubMed Open full text

Identifiers

PMID: 21663628
DOI: 10.1186/1471-2164-12-304
PMCID: PMC3128069

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Identification of SNP and SSR markers in eggplant using RAD tag sequencing.PMID 21663628Read ↗

Gene-based microsatellite development for mapping and phylogeny studies in eggplant.Semantic proximity Read ↗

Transcriptome analysis and molecular marker discovery in Solanum incanum and S. aethiopicum, two close relatives of the common eggplant (Solanum melongena) with interest for breeding.Semantic proximity Read ↗

A RAD tag derived marker based eggplant linkage map and the location of QTLs determining anthocyanin pigmentation.Semantic proximity Read ↗

Improved genome assembly and pan-genome provide key insights into eggplant domestication and breeding.Semantic proximity Read ↗

The Contribution of the Solanaceae Coordinated Agricultural Project to Potato BreedingSemantic proximity Read ↗

Genome sequence and analysis of the eggplant ( <i>Solanum melongena</i> L.)Semantic proximity Read ↗

Genomic analysis of the native European Solanum species, S. dulcamara.Semantic proximity Read ↗

Development of gene-based markers and construction of an integrated linkage map in eggplant by using Solanum orthologous (SOL) gene sets.Semantic proximity Read ↗

Conventional and new genetic resources for an eggplant breeding revolution.Semantic proximity Read ↗

Integration of two diploid potato linkage maps with the potato genome sequence.Semantic proximity Read ↗

Application of SolCAP Genotyping in Potato (Solanum tuberosum L.) Association Mapping.Semantic proximity Read ↗

Association Mapping for Fruit, Plant and Leaf Morphology Traits in Eggplant.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.