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Article

A genetic map of Xenopus tropicalis.

Developmental biology - 1 Jun 2011

Wells Dan E, Gutierrez Laura, Xu Zhenkang, Krylov Vladimir, Macha Jaroslav, Blankenburg Kerstin P, Hitchens Matthew, Bellot Larry J, Spivey Mary, Stemple Derek L, Kowis Andria, Ye Yuan, Pasternak Shiran, Owen Jenetta, Tran Thu, Slavikova Renata, Tumova Lucie, Tlapakova Tereza, Seifertova Eva, Scherer Steven E, Sater Amy K

Abstract excerpt

We present a genetic map for Xenopus tropicalis, consisting of 2886 Simple Sequence Length Polymorphism (SSLP) markers. Using a bioinformatics-based strategy, we identified unique SSLPs within the X. tropicalis genome. Scaffolds from X. tropicalis genome assembly 2.0 (JGI) were scanned for Simple Sequence Repeats (SSRs); unique SSRs were then tested for amplification and polymorphisms using DNA from inbred...

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Identifiers

PMID: 21458440
DOI: 10.1016/j.ydbio.2011.03.022
PMCID: PMC3098391

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