Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data.

The Plant journal : for cell and molecular biology - 1 Apr 2011

Sabot François, Picault Nathalie, El-Baidouri Moaine, Llauro Christel, Chaparro Cristian, Piegu Benoit, Roulin Anne, Guiderdoni Emmanuel, Delabastide Mélissa, McCombie Richard, Panaud Olivier

Abstract excerpt

Transposable elements (TEs) are mobile entities that densely populate most eukaryotic genomes and contribute to both their structural and functional dynamics. However, most TE-related sequences in both plant and animal genomes correspond to inactive, degenerated elements, due to the combined effect of silencing pathways and elimination through deletions. One of the major difficulties in fully characterizing the...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosome Mapping
Share to Chromosomes, Plant

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to DNA, Plant

Share to DNA Transposable Elements

Share to Genome, Plant

Share to Mutagenesis, Insertional

Share to Sequence Analysis, DNA

Source

Identifiers

PMID: 21219509
DOI: 10.1111/j.1365-313X.2011.04492.x

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data.PMID 21219509Read ↗

Gene disruption by structural mutations drives selection in US rice breeding over the last century.Semantic proximity Read ↗

The use of RelocaTE and unassembled short reads to produce high-resolution snapshots of transposable element generated diversity in rice.Semantic proximity Read ↗

Transposable elements impact the population divergence of rice blast fungus <i>Magnaporthe oryzae</i>Semantic proximity Read ↗

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.Semantic proximity Read ↗

Transposon-mediated epigenetic regulation contributes to phenotypic diversity and environmental adaptation in rice.Semantic proximity Read ↗

Transposable elements impact the population divergence of rice blast fungus Magnaporthe oryzae.Semantic proximity Read ↗

A syntelog-based pan-genome provides insights into rice domestication and de-domesticationSemantic proximity Read ↗

Gapless <i>indica</i> rice genome reveals synergistic effects of active transposable elements and segmental duplications that promote rice genome evolutionSemantic proximity Read ↗

Discovery of novel genes derived from transposable elements using integrative genomic analysis.Semantic proximity Read ↗

Tracking the genome-wide outcomes of a transposable element burst over decades of amplification.Semantic proximity Read ↗

Twelve Platinum-Standard Reference Genomes Sequences (PSRefSeq) that complete the full range of genetic diversity of Asian riceSemantic proximity Read ↗

Sequencing and de novo assembly of a near complete indica rice genome.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.