Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Mapping and linkage disequilibrium analysis with a genome-wide collection of SNPs that detect polymorphism in cultivated tomato.

Journal of experimental botany - 1 Mar 2011

Robbins Matthew D, Sim Sung-Chur, Yang Wencai, Van Deynze Allen, van der Knaap Esther, Joobeur Tarek, Francis David M

Abstract excerpt

The history of tomato (Solanum lycopersicum L.) improvement includes genetic bottlenecks, wild species introgressions, and divergence into distinct market classes. This history makes tomato an excellent model to investigate the effects of selection on genome variation. A combination of linkage mapping in two F(2) populations and physical mapping with emerging genome sequence data was used to position 434...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosome Mapping
Share to Genome, Plant

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Linkage Disequilibrium

Share to Polymorphism, Single Nucleotide

Share to Solanum lycopersicum

Source

Open in PubMed Open full text

Identifiers

PMID: 21193580
DOI: 10.1093/jxb/erq367
PMCID: PMC3060673

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Mapping and linkage disequilibrium analysis with a genome-wide collection of SNPs that detect polymorphism in cultivated tomato.PMID 21193580Read ↗

High-density SNP genotyping of tomato (Solanum lycopersicum L.) reveals patterns of genetic variation due to breeding.Semantic proximity Read ↗

Genomic analyses provide insights into the history of tomato breeding.Semantic proximity Read ↗

Genome-wide sequence variations between wild and cultivated tomato species revisited by whole genome sequence mapping.Semantic proximity Read ↗

Use of modern tomato breeding germplasm for deciphering the genetic control of agronomical traits by Genome Wide Association study.Semantic proximity Read ↗

SNP genotyping reveals genetic diversity between cultivated landraces and contemporary varieties of tomato.Semantic proximity Read ↗

Population structure and genetic differentiation associated with breeding history and selection in tomato (Solanum lycopersicum L.).Semantic proximity Read ↗

Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding.Semantic proximity Read ↗

Genome-wide association studies using single nucleotide polymorphism markers developed by re-sequencing of the genomes of cultivated tomato.Semantic proximity Read ↗

GWAS Based on RNA-Seq SNPs and High-Throughput Phenotyping Combined with Climatic Data Highlights the Reservoir of Valuable Genetic Diversity in Regional Tomato Landraces.Semantic proximity Read ↗

Phenotypic diversity and association mapping for fruit quality traits in cultivated tomato and related species.Semantic proximity Read ↗

Tomato breeding in the genomics era: insights from a SNP array.Semantic proximity Read ↗

Genome-wide association mapping in tomato (Solanum lycopersicum) is possible using genome admixture of Solanum lycopersicum var. cerasiforme.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.