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Article

SSR mining in oil palm EST database: application in oil palm germplasm diversity studies.

Journal of genetics - 1 Aug 2010

Ting Ngoot-Chin, Zaki Noorhariza Mohd, Rosli Rozana, Low Eng-Ti Leslie, Ithnin Maizura, Cheah Suan-Choo, Tan Soon-Guan, Singh Rajinder

Abstract excerpt

This study reports on the detection of additional expressed sequence tags (EST) derived simple sequence repeat (SSR) markers for the oil palm. A large collection of 19243 Elaeis guineensis ESTs were assembled to give 10258 unique sequences, of which 629 ESTs were found to contain 722 SSRs with a variety of motifs. Dinucleotide repeats formed the largest group (45.6%) consisting of 66.9% AG/CT, 21.9% AT/AT, 10.9%...

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PMID: 20861564
DOI: 10.1007/s12041-010-0053-7

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AGT

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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