Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

A scalable method for analysis and display of DNA sequences.

PloS one - 2 Oct 2009

Sirovich Lawrence, Stoeckle Mark Y, Zhang Yu

Abstract excerpt

BACKGROUND: Comparative DNA sequence analysis provides insight into evolution and helps construct a natural classification reflecting the Tree of Life. The growing numbers of organisms represented in DNA databases challenge tree-building techniques and the vertical hierarchical classification may obscure relationships among some groups. Approaches that can incorporate sequence data from large numbers of taxa and...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Birds
Share to Butterflies
Share to Databases, Genetic

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Fishes

Share to Genetic Vectors

Share to Models, Theoretical

Share to Nucleotides

Share to Protein Structure, Tertiary

Source

Open in PubMed Open full text

Identifiers

PMID: 19798412
DOI: 10.1371/journal.pone.0007051
PMCID: PMC2749217

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

A scalable method for analysis and display of DNA sequences.PMID 19798412Read ↗

Structural analysis of biodiversity.Semantic proximity Read ↗

Identification of Birds through DNA Barcodes.Semantic proximity Read ↗

Scalable methods for analyzing and visualizing phylogenetic placement of metagenomic samplesSemantic proximity Read ↗

A novel Vector-Symbolic Architecture for graph encoding and its application to viral pangenome-based species classificationSemantic proximity Read ↗

UITOTO: a software for generating molecular diagnoses for species descriptionsSemantic proximity Read ↗

dgfr: an R package to assess sequence diversity of gene families.Semantic proximity Read ↗

Metacoder: An R package for visualization and manipulation of community taxonomic diversity data.Semantic proximity Read ↗

Phylogenetic tree-building.Semantic proximity Read ↗

An Explainable AI Framework Integrating Machine and Deep Learning Models for Multi-Species DNA Functional Group ClassificationSemantic proximity Read ↗

Searching for evidence of selection in avian DNA barcodes.Semantic proximity Read ↗

Trees of trees: an approach to comparing multiple alternative phylogenies.Semantic proximity Read ↗

Comparative analysis and visualization of multiple collinear genomes.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.