Article
Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork.
BMC genetics - 18 Nov 2008
Druka Arnis, Druka Ilze, Centeno Arthur G, Li Hongqiang, Sun Zhaohui, Thomas William T B, Bonar Nicola, Steffenson Brian J, Ullrich Steven E, Kleinhofs Andris, Wise Roger P, Close Timothy J, Potokina Elena, Luo Zewei, Wagner Carola, Schweizer Günther F, Marshall David F, Kearsey Michael J, Williams Robert W, Waugh Robbie
Abstract excerpt
BACKGROUND: A typical genetical genomics experiment results in four separate data sets; genotype, gene expression, higher-order phenotypic data and metadata that describe the protocols, processing and the array platform. Used in concert, these data sets provide the opportunity to perform genetic analysis at a systems level. Their predictive power is largely determined by the gene expression dataset where tens of...
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