Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices.

Bioinformatics (Oxford, England) - 15 Jul 2007

Eyal Eran, Pietrokovski Shmuel, Bahar Ivet

Abstract excerpt

UNLABELLED: Identification of correlated amino acids in proteins has been a topic of broad interest in view of its functional implications and importance in protein design. A new set of pair-to-pair (P2P) substitution matrices for amino acids was recently introduced as a useful tool for inferring information on such correlated sites. We present a website developed for automated application of these matrices for...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Amino Acids
Share to Automation
Share to Catalytic Domain

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Computer Graphics

Share to Models, Statistical

Share to Probability

Share to Proteins

Share to User-Computer Interface

Source

Identifiers

PMID: 17496318
DOI: 10.1093/bioinformatics/btm256

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices.PMID 17496318Read ↗

Correlated mutations and residue contacts in proteins.Semantic proximity Read ↗

Correlated mutations: a hallmark of phenotypic amino acid substitutions.Semantic proximity Read ↗

Codon-level information improves predictions of inter-residue contacts in proteins by correlated mutation analysis.Semantic proximity Read ↗

AAindex: Amino Acid Index Database.Semantic proximity Read ↗

In silico two-hybrid system for the selection of physically interacting protein pairs.Semantic proximity Read ↗

A graphical interface for correlated mutations and other protein structure prediction methods.Semantic proximity Read ↗

A novel algorithm for detecting multiple covariance and clustering of biological sequences.Semantic proximity Read ↗

AAindex: amino acid index database.Semantic proximity Read ↗

Is there an optimal substitution matrix for contact prediction with correlated mutations?Semantic proximity Read ↗

Detection and reduction of evolutionary noise in correlated mutation analysis.Semantic proximity Read ↗

Can correlated mutations in protein domain families be used for protein design?Semantic proximity Read ↗

Sibe: a computation tool to apply protein sequence statistics to folding and designSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.