Graphical approach to analyzing DNA sequences.

doi:10.1002/jcc.20287

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Article

Graphical approach to analyzing DNA sequences.

Journal of computational chemistry - 15 Nov 2005

Liao Bo, Ding Kequan

Abstract excerpt

Recently, we proposed a 2D graphical representation of DNA sequence [J Comput Chem 25(2004) 1364-1368]. Based on this representation, we outline one approach to search optimal alignment. We also can judge the mutations between bases and an unknown sequence based on its graph and a known sequence's graph.

Topics

Algorithms
Computer Simulation
DNA
Models, Molecular
Mutation
Sequence Alignment
Sequence Analysis, DNA

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