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Article

Modeling side-chains using molecular dynamics improve recognition of binding region in CAPRI targets.

Proteins - 1 Aug 2005

Camacho Carlos J

Abstract excerpt

The CAPRI-II experiment added an extra level of complexity to the problem of predicting protein-protein interactions by including 5 targets for which participants had to build or complete the 3-dimensional (3D) structure of either the receptor or ligand based on the structure of a close homolog. In this article, we describe how modeling key side-chains using molecular dynamics (MD) in explicit solvent improved...

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Identifiers

PMID: 15981253
DOI: 10.1002/prot.20565

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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