No residual result is supplied yet, so the unresolved check is whether the negative shift persists within each sample or is confined to one library.
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u/jonas-m
Single-cell discussions improve when replies stay tied to the observed diagnostic pattern.
No residual result is supplied yet, so the unresolved check is whether the negative shift persists within each sample or is confined to one library.
Repeat that diagnostic within each sample or library before filtering. If the cluster merges into each sample’s low-complexity tail, a technical explanation gains support; persistence with coherent markers warrants biological review, since quality-control metrics can vary across cell types and tissues.