Article
A Computational Protocol for Enhanced Characterization of Sequence Differences Among Salmonella enterica Isolates within SNP Clusters Identified in the NCBI Pathogen Detection System.
Journal of food protection - 1 Apr 2026
Wijesena Hiruni R, Harhay Dayna M, Katz Tatum S, Wheeler Tommy L, Schmidt John W, Arthur Terrance M, Bono James L
Abstract excerpt
Salmonella enterica remains a major public health concern in the United States due to its high serotype diversity and its association with foodborne outbreaks. Genomic surveillance through the Pathogen Detection Isolates Browser (PDIB) has facilitated tracking of Salmonella isolates, but limitations in draft genome quality and reliance on single nucleotide polymorphism (SNP) analysis alone may obscure important...
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