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Genome-wide study of salt tolerance in USDA tomato germplasm at seedling stage.

Scientific reports - 6 Dec 2025

Alatawi Ibtisam, Xiong Haizheng, Alkabkabi Hanan, Chiwina Kenani, Qu Yuejun, Du Renjie, Luo Qun, Ling Kai-Shu, Shi Ainong

Abstract excerpt

Salinity is a major constraint on tomato production, increasingly intensified by climate change. This study aimed to develop superior salt-tolerant tomato cultivars by evaluating genetic variation in salt tolerance, identifying associated single-nucleotide polymorphism (SNP) markers through genome-wide association studies (GWAS), and applying genomic prediction (GP). A total of 265 tomato accessions from the USDA...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 41353245
DOI: 10.1038/s41598-025-30759-y
PMCID: PMC12783858

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TPR

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