Article
Multiplex amplicon sequencing for the comprehensive genotyping of Mycoplasma pneumoniae.
Microbiology spectrum - 1 Jul 2025
Kubota Hiroaki, Okuno Rumi, Kenri Tsuyoshi, Uchitani Yumi, Ariyoshi Tsukasa, Yoshida Isao, Kobayashi Kai, Mitobe Morika, Suzuki Jun, Sadamasu Kenji
Abstract excerpt
Major genotyping methods used to characterize Mycoplasma pneumoniae strains are based on various experimental approaches that need to be implemented in parallel for each strain. In this study, we developed a comprehensive workflow based on amplicon sequencing using next-generation sequencing. This workflow comprised PCR amplification with seven tubes, collection into single tubes, shotgun sequencing, de novo...
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