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QTL discovery for agronomic and quality traits in diploid potato clones using PotatoMASH amplicon sequencing.

G3 (Bethesda, Md.) - 7 Oct 2024

Vexler Lea, Leyva-Perez Maria de la O, Konkolewska Agnieszka, Clot Corentin R, Byrne Stephen, Griffin Denis, Ruttink Tom, Hutten Ronald C B, Engelen Christel, Visser Richard G F, Prigge Vanessa, Wagener Silke, Lairy-Joly Gisele, Driesprong Jan-David, Riis Sundmark Ea Høegh, Rookmaker A Nico O, van Eck Herman J, Milbourne Dan

Abstract excerpt

We genotyped a population of 618 diploid potato clones derived from six independent potato-breeding programmes from NW-Europe. The diploids were phenotyped for 23 traits, using standardized protocols and common check varieties, enabling us to derive whole population estimators for most traits. We subsequently performed a genome-wide association study (GWAS) to identify quantitative trait loci (QTL) for all traits...

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Identifiers

PMID: 39028844
DOI: 10.1093/g3journal/jkae164
PMCID: PMC11457057

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