Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Large-scale single-virus genomics uncovers hidden diversity of river water viruses and diversified gene profiles.

The ISME journal - 8 Jan 2024

Nishikawa Yohei, Wagatsuma Ryota, Tsukada Yuko, Chia-Ling Lin, Chijiiwa Rieka, Hosokawa Masahito, Takeyama Haruko

Abstract excerpt

Environmental viruses (primarily bacteriophages) are widely recognized as playing an important role in ecosystem homeostasis through the infection of host cells. However, the majority of environmental viruses are still unknown as their mosaic structure and frequent mutations in their sequences hinder genome construction in current metagenomics. To enable the large-scale acquisition of environmental viral genomes,...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bacteriophages
Share to Genome, Viral

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomics

Share to High-Throughput Nucleotide Sequencing

Share to Metagenome

Share to Metagenomics

Share to Rivers

Share to Viruses

Source

Open in PubMed Open full text

Identifiers

PMID: 38976038
DOI: 10.1093/ismejo/wrae124
PMCID: PMC11283719

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 3 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Large-scale single-virus genomics uncovers hidden diversity of river water viruses and diversified gene profiles.PMID 38976038Read ↗

Insights into the global freshwater viromeSemantic proximity Read ↗

High-sensitivity whole-genome recovery of single viral species in environmental samplesSemantic proximity Read ↗

Metatranscriptomic data mining together with microfluidic card uncovered the potential pathogens and seasonal RNA viral ecology in a drinking water sourceSemantic proximity Read ↗

Targeted whole-genome recovery of single viral species in a complex environmental sampleSemantic proximity Read ↗

Aquatic viral metagenomics: Lights and shadows.Semantic proximity Read ↗

Single-virus genomics and beyond.Semantic proximity Read ↗

Diversity of virophages in metagenomic data sets.Semantic proximity Read ↗

The Virophage Family Lavidaviridae.Semantic proximity Read ↗

Viromic Analysis of Wastewater Input to a River Catchment Reveals a Diverse Assemblage of RNA VirusesSemantic proximity Read ↗

Validation of an unbiased metagenomic detection assay for RNA viruses in viral transport media and plasmaSemantic proximity Read ↗

Diversity of environmental single-stranded DNA phages revealed by PCR amplification of the partial major capsid proteinSemantic proximity Read ↗

Long-read nanopore shotgun eDNA sequencing for river biodiversity, pollution and environmental health monitoringSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.