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Article

Deep sequencing of Escherichia coli exposes colonisation diversity and impact of antibiotics in Punjab, Pakistan.

Nature communications - 18 Jun 2024

Khawaja Tamim, Mäklin Tommi, Kallonen Teemu, Gladstone Rebecca A, Pöntinen Anna K, Mero Sointu, Thorpe Harry A, Samuelsen Ørjan, Parkhill Julian, Izhar Mateen, Akhtar M Waheed, Corander Jukka, Kantele Anu

Abstract excerpt

Multi-drug resistant (MDR) E. coli constitute a major public health burden globally, reaching the highest prevalence in the global south yet frequently flowing with travellers to other regions. However, our comprehension of the entire genetic diversity of E. coli colonising local populations remains limited. We quantified this diversity, its associated antimicrobial resistance (AMR), and assessed the impact of...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 38890378
DOI: 10.1038/s41467-024-49591-5
PMCID: PMC11189469

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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