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A comprehensive framework for detecting copy number variants from single nucleotide polymorphism data: 'rCNV', a versatile r package for paralogue and CNV detection.

Molecular ecology resources - 1 Nov 2023

Karunarathne Piyal, Zhou Qiujie, Schliep Klaus, Milesi Pascal

Abstract excerpt

Recent studies have highlighted the significant role of copy number variants (CNVs) in phenotypic diversity, environmental adaptation and species divergence across eukaryotes. The presence of CNVs also has the potential to introduce genotyping biases, which can pose challenges to accurate population and quantitative genetic analyses. However, detecting CNVs in genomes, particularly in non-model organisms,...

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PMID: 37515483
DOI: 10.1111/1755-0998.13843

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