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Article

H3AGWAS: a portable workflow for genome wide association studies.

BMC bioinformatics - 19 Nov 2022

Brandenburg Jean-Tristan, Clark Lindsay, Botha Gerrit, Panji Sumir, Baichoo Shakuntala, Fields Christopher, Hazelhurst Scott

Abstract excerpt

BACKGROUND: Genome-wide association studies (GWAS) are a powerful method to detect associations between variants and phenotypes. A GWAS requires several complex computations with large data sets, and many steps may need to be repeated with varying parameters. Manual running of these analyses can be tedious, error-prone and hard to reproduce. RESULTS: The H3AGWAS workflow from the Pan-African Bioinformatics...

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PMID: 36402955
DOI: 10.1186/s12859-022-05034-w
PMCID: PMC9675212

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