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Article

hCoCena: horizontal integration and analysis of transcriptomics datasets.

Bioinformatics (Oxford, England) - 14 Oct 2022

Oestreich Marie, Holsten Lisa, Agrawal Shobhit, Dahm Kilian, Koch Philipp, Jin Han, Becker Matthias, Ulas Thomas

Abstract excerpt

MOTIVATION: Transcriptome-based gene co-expression analysis has become a standard procedure for structured and contextualized understanding and comparison of different conditions and phenotypes. Since large study designs with a broad variety of conditions are costly and laborious, extensive comparisons are hindered when utilizing only a single dataset. Thus, there is an increased need for tools that allow the...

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PMID: 36018233
DOI: 10.1093/bioinformatics/btac589
PMCID: PMC9563699

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