Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Development of a high-throughput SNP array for sea cucumber (Apostichopus japonicus) and its application in genomic selection with MCP regularized deep neural networks.

Genomics - 1 Jul 2022

Lv Jia, Wang Yangfan, Ni Ping, Lin Ping, Hou Hu, Ding Jun, Chang Yaqing, Hu Jingjie, Wang Shi, Bao Zhenmin

Abstract excerpt

High-throughput single nucleotide polymorphism (SNP) genotyping assays are powerful tools for genetic studies and genomic breeding applications for many species. Though large numbers of SNPs have been identified in sea cucumber (Apostichopus japonicus), but, as yet, no high-throughput genotyping platform is available for this species. In this study, we designed and developed a high-throughput 24 K SNP genotyping...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bayes Theorem
Share to Genomics

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genotype

Share to Neural Networks, Computer

Share to Polymorphism, Single Nucleotide

Source

Identifiers

PMID: 35820495
DOI: 10.1016/j.ygeno.2022.110426

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Development of a high-throughput SNP array for sea cucumber (Apostichopus japonicus) and its application in genomic selection with MCP regularized deep neural networks.PMID 35820495Read ↗

Characterization of fifteen SNP markers by mining EST in sea cucumber, Apostichopus japonicus.Semantic proximity Read ↗

A new SNP genotyping technology Target SNP-seq and its application in genetic analysis of cucumber varieties.Semantic proximity Read ↗

Ultrahigh-density linkage map for cultivated cucumber (Cucumis sativus L.) using a single-nucleotide polymorphism genotyping array.Semantic proximity Read ↗

Development of 101 gene-based single nucleotide polymorphism markers in sea cucumber, Apostichopus japonicus.Semantic proximity Read ↗

Draft genome of the sea cucumber Apostichopus japonicus and genetic polymorphism among color variants.Semantic proximity Read ↗

A novel genomic selection method combining GBLUP and LASSO.Semantic proximity Read ↗

A high-performance SNP panel developed by machine-learning approaches for characterizing genetic differences of Southern and Northern Han Chinese, Korean, and Japanese individuals.Semantic proximity Read ↗

DeepAnnotation: A novel interpretable deep learning-based genomic selection model that integrates comprehensive functional annotations.Semantic proximity Read ↗

Construction and evaluation of a high-density SNP array for the Pacific oyster (Crassostrea gigas).Semantic proximity Read ↗

Recent status of Genotyping by Sequencing (GBS) Technology in cucumber (Cucumis sativus L.): a review.Semantic proximity Read ↗

Identification of Key Genes Correlated with Economic Trait Superiorities and Their SNP Screening Through Transcriptome Comparisons, WGCNA and Pearson Correlation Coefficient in the Sea Cucumber Apostichopus Japonicus.Semantic proximity Read ↗

Development of a Medium Density Combined-Species SNP Array for Pacific and European Oysters (Crassostrea gigas and Ostrea edulis).Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.