Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms.

doi:10.1099/mgen.0.000684

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Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms.

Microbial genomics - 1 Nov 2021

Barona-Gómez Francisco, Delaye Luis, Díaz-Valenzuela Erik, Plisson Fabien, Cruz-Pérez Arely, Díaz-Sánchez Mauricio, García-Sepúlveda Christian A, Sanchez-Flores Alejandro, Pérez-Abreu Rafael, Valencia-Valdespino Francisco J, Vega-Magaña Natali, Muñoz-Valle José Francisco, García-González Octavio Patricio, Bernal-Silva Sofía, Comas-García Andreu, Cibrián-Jaramillo Angélica

Abstract excerpt

Understanding the evolution of the SARS-CoV-2 virus in various regions of the world during the Covid-19 pandemic is essential to help mitigate the effects of this devastating disease. We describe the phylogenomic and population genetic patterns of the virus in Mexico during the pre-vaccination stage, including asymptomatic carriers. A real-time quantitative PCR screening and phylogenomic reconstructions directed...

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PMID: 34846283
DOI: 10.1099/mgen.0.000684
PMCID: PMC8743546

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Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms.PMID 34846283Read ↗

Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4, B.1.1.222 or B.1.1.519 and B.1.243 with mutations in the Spike protein and the NucleocapsidSemantic proximity Read ↗

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