Article
PlantDeepSEA, a deep learning-based web service to predict the regulatory effects of genomic variants in plants.
Nucleic acids research - 2 Jul 2021
Zhao Hu, Tu Zhuo, Liu Yinmeng, Zong Zhanxiang, Li Jiacheng, Liu Hao, Xiong Feng, Zhan Jinling, Hu Xuehai, Xie Weibo
Abstract excerpt
Characterizing regulatory effects of genomic variants in plants remains a challenge. Although several tools based on deep-learning models and large-scale chromatin-profiling data have been available to predict regulatory elements and variant effects, no dedicated tools or web services have been reported in plants. Here, we present PlantDeepSEA as a deep learning-based web service to predict regulatory effects of...
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