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Profiling SNP and Nucleotide Diversity to Characterize Mekong Delta Rice Landraces in Southeast Asian Populations.

The plant genome - 1 Nov 2019

Tam Nguyen Thanh, Dwiyanti Maria Stefanie, Koide Yohei, Nagano Atsushi J, Ky Huynh, Tin Huynh Quang, Hien Nguyen Loc, Dung Le Viet, Kishima Yuji

Abstract excerpt

CORE IDEAS: Single nucleotide polymorphism (SNP) analyses are a powerful tool to examine structure of local rice population. 3000 dataset of IRRI facilitates SNP profiling of Southeast Asian rice populations. Mekong Delta population is featured by comparisons with the other populations. The low π-value SNPs well-profile unique genetic regions in their genomes. Recent analyses using single nucleotide polymorphism...

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PMID: 33016580
DOI: 10.3835/plantgenome2019.06.0042
PMCID: PMC12810104

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