Article
Genetic diversity of MHC-B in 12 chicken populations in Korea revealed by single-nucleotide polymorphisms.
Immunogenetics - 1 Sept 2020
Manjula Prabuddha, Bed'Hom Bertrand, Hoque Md Rashedul, Cho Sunghyun, Seo Dongwon, Chazara Olympe, Lee Seung Hwan, Lee Jun Heon
Abstract excerpt
This study used a single-nucleotide polymorphism (SNP) panel to characterise the diversity in the major histocompatibility complex B region (MHC-B) in 12 chicken populations in Korea. Samples were genotyped for 96 MHC-B SNPs using an Illumina GoldenGate genotyping assay. The MHC-B SNP haplotypes were predicted using 58 informative SNPs and a coalescence-based Bayesian algorithm implemented by the PHASE program...
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