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Narrow genetic base shapes population structure and linkage disequilibrium in an industrial oilseed crop, Brassica carinata A. Braun.

Scientific reports - 28 Jul 2020

Khedikar Yogendra, Clarke Wayne E, Chen Lifeng, Higgins Erin E, Kagale Sateesh, Koh Chu Shin, Bennett Rick, Parkin Isobel A P

Abstract excerpt

Ethiopian mustard (Brassica carinata A. Braun) is an emerging sustainable source of vegetable oil, in particular for the biofuel industry. The present study exploited genome assemblies of the Brassica diploids, Brassica nigra and Brassica oleracea, to discover over 10,000 genome-wide SNPs using genotype by sequencing of 620 B. carinata lines. The analyses revealed a SNP frequency of one every 91.7 kb, a...

Topics

Chromosomes, Plant
Crops, Agricultural
Genetic Variation
Genetics, Population
Genome, Plant
Haplotypes
Industry
Linkage Disequilibrium
Mustard Plant
Polymorphism, Single Nucleotide

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Selection, Genetic

Source

Open in PubMed Open full text

Identifiers

PMID: 32724070
DOI: 10.1038/s41598-020-69255-w
PMCID: PMC7387349

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 31 Aug 2026.

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