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Article

A unified catalog of 204,938 reference genomes from the human gut microbiome.

Nature biotechnology - 1 Jan 2021

Almeida Alexandre, Nayfach Stephen, Boland Miguel, Strozzi Francesco, Beracochea Martin, Shi Zhou Jason, Pollard Katherine S, Sakharova Ekaterina, Parks Donovan H, Hugenholtz Philip, Segata Nicola, Kyrpides Nikos C, Finn Robert D

Abstract excerpt

Comprehensive, high-quality reference genomes are required for functional characterization and taxonomic assignment of the human gut microbiota. We present the Unified Human Gastrointestinal Genome (UHGG) collection, comprising 204,938 nonredundant genomes from 4,644 gut prokaryotes. These genomes encode >170 million protein sequences, which we collated in the Unified Human Gastrointestinal Protein (UHGP)...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 32690973
DOI: 10.1038/s41587-020-0603-3
PMCID: PMC7801254

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