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Identifying barley pan-genome sequence anchors using genetic mapping and machine learning.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 1 Sept 2020

Gao Shang, Wu Jinran, Stiller Jiri, Zheng Zhi, Zhou Meixue, Wang You-Gan, Liu Chunji

Abstract excerpt

KEY MESSAGE: We identified 1.844 million barley pan-genome sequence anchors from 12,306 genotypes using genetic mapping and machine learning. There is increasing evidence that genes from a given crop genotype are far to cover all genes in that species; thus, building more comprehensive pan-genomes is of great importance in genetic research and breeding. Obtaining a thousand-genotype scale pan-genome using...

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PMID: 32448920
DOI: 10.1007/s00122-020-03615-y

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