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Article

Metagenomic to evaluate norovirus genomic diversity in oysters: Impact on hexamer selection and targeted capture-based enrichment.

International journal of food microbiology - 16 Jun 2020

Strubbia Sofia, Schaeffer Julien, Besnard Alban, Wacrenier Candice, Le Mennec Cécile, Garry Pascal, Desdouits Marion, Le Guyader Françoise S

Abstract excerpt

Human virus transmission through food consumption has been identified since many years and the international trade increases the risk of dissemination of viral pathogens. The development of metagenomic approach holds many promises for the surveillance of viruses in food and water. This work aimed to analyze norovirus diversity and to evaluate strain-dependent accumulation patterns in three oyster types by using a...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

Identifiers

PMID: 32200157
DOI: 10.1016/j.ijfoodmicro.2020.108588

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