Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples.

doi:10.1016/j.ygeno.2019.10.022

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Article

Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples.

Genomics - 1 Mar 2020

Cocking Jill Hager, Deberg Michael, Schupp Jim, Sahl Jason, Wiggins Kristin, Porty Ariel, Hornstra Heidie M, Hepp Crystal, Jardine Claire, Furstenau Tara N, Schulte-Hostedde Albrecht, Fofanov Viacheslav Y, Pearson Talima

Abstract excerpt

Whole genome sequencing (WGS) is a widely available, inexpensive means of providing a wealth of information about an organism's diversity and evolution. However, WGS for many pathogenic bacteria remain limited because they are difficult, slow and/or dangerous to culture. To avoid culturing, metagenomic sequencing can be performed directly on samples, but the sequencing effort required to characterize low...

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PMID: 31678592
DOI: 10.1016/j.ygeno.2019.10.022
PMCID: PMC7199880

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.