Genome variations between rhizosphere and bulk soil ecotypes of a Pseudomonas koreensis population.

doi:10.1111/1462-2920.14363

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Article

Genome variations between rhizosphere and bulk soil ecotypes of a Pseudomonas koreensis population.

Environmental microbiology - 1 Dec 2018

Lopes Lucas Dantas, Pereira E Silva Michele de C, Weisberg Alexandra J, Davis Edward W, Yan Qing, Varize Camila de S, Wu Chih-Feng, Chang Jeff H, Loper Joyce E, Andreote Fernando D

Abstract excerpt

Bulk soil and rhizosphere are soil compartments selecting different microbial communities. However, it is unknown whether this selection also can change the genome content of specific bacterial taxa, splitting a population in distinct ecotypes. To answer this question we compared the genome sequences of 53 isolates obtained from sugarcane rhizosphere (28) and bulk soil (25). These isolates were previously...

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PMID: 30033663
DOI: 10.1111/1462-2920.14363

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.