A comparative synteny analysis tool for target-gene SNP marker discovery: connecting genomics data to breeding in Solanaceae.

doi:10.1093/database/bay047

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Article

A comparative synteny analysis tool for target-gene SNP marker discovery: connecting genomics data to breeding in Solanaceae.

Database : the journal of biological databases and curation - 1 Jan 2018

Choe Junkyoung, Kim Ji-Eun, Lee Bong-Woo, Lee Jeong Hee, Nam Moon, Park Youn-Il, Jo Sung-Hwan

Abstract excerpt

It is necessary for molecular breeders to overcome the difficulties in applying abundant genomic information to crop breeding. Candidate orthologs would be discovered more efficiently in less-studied crops if the information gained from studies of related crops were used. We developed a comparative analysis tool and web-based genome viewer to identify orthologous genes based synteny as well as sequence similarity...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 29873704
DOI: 10.1093/database/bay047
PMCID: PMC6007222

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.